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Hopf Topology Archive
Algebraic topology and related areas. (~400 articles)
http://hopf.math.purdue.edu/
MGNet Preprints
Multigrid and other methods for PDE simulation. (100+ articles)
http://www.mgnet.org/mgnet-papers.html
K-theory Preprint Archive
K-theory (generalized cohomology theories). (~400 articles)
http://www.math.uiuc.edu/K-theory/
Mathematical Physics Archive
Also called mp_arc; at UT Austin. (2000- articles)
http://www.ma.utexas.edu/mp_arc/
European Singularities Network
Singularities in geometry and complex analysis. Searchable index (100+ articles).
http://home.imf.au.dk/esn/
Algebraic Number Theory Archive
Number theory/arithmetic geometry. (~200 articles)
http://www.math.uiuc.edu/Algebraic-Number-Theory/
Conservation Laws Preprint Server
Analysis/simulation of conservative PDEs. (100+ articles)
http://www.math.ntnu.no/conservation/
Banach Space Bulletin Board
Banach spaces/functional analysis. (~400 articles, arXiv overlay)
http://www.math.okstate.edu/~alspach/banach/
Cryptology ePrint Archive
At the IACR.
http://eprint.iacr.org/
Groups, Representations, and Cohomology Preprint Archive
Algebraic topology/finite group theory. (100s of articles.)
ftp://byrd.math.uga.edu/pub/html/archive.html
Markov Chain Monte Carlo Preprint Service
A list of all registered papers on MCMC methodology currently submitted for publication. Based at the Statistical Laboratory of the University of Cambridge.
http://www.statslab.cam.ac.uk/~mcmc/
Field Arithmetic Archive
Galois theory of fields/group theory. (50- articles)
http://www.cs.bgu.ac.il/research/Fields/
Shelah's Archive
Papers by Saharon Shelah in logic and related. (100s of articles, arXiv mirrored)
http://www.math.rutgers.edu/~shelarch/
Linear Algebraic Groups and Related Structures
Including Azumaya Algebras, Algebras with Involutions, Brauer Groups, Quadratic and Hermitean Forms, Witt Rings, Lie and Jordan Algebras, Homogeneous Varieties. DVI, PS, PDF (~80 items).
http://www.mathematik.uni-bielefeld.de/lag/
Probability Abstract Service
Probability Abstract Letters are sent about once every two months. The subscription is free.
http://www.math.washington.edu/~prob/
Optimization Online
A repository of eprints about optimisation and related topics.
http://www.optimization-online.org/
Jordan Theory Preprint Archives
Jordan algebras and related topics (~100 articles).
http://mathematik.uibk.ac.at/jordan/
Center for Commutative Algebra
Preprint announcements and links.
http://www.commalg.org/preprints/
Topology Atlas Preprints
Mostly general topology. (400+ articles)
http://at.yorku.ca/topology/preprint.htm
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