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AlgoNomics
Provides online, as well as on-site, tools for protein sequence analysis and structure prediction. Focused on the relationship between the amino acid sequence of proteins and their function.
http://www.algonomics.com

Life Science Informatics Solutions
InforMax's solutions combine molecular biology techniques, information technology and Internet communications to automate the research process, facilitating high-speed analysis and dramatically increasing productivity.
http://www.informaxinc.com

Informagen
Produces DNA secondary structure prediction software including alignments and Chous-Fasman analysis.
http://www.informagen.com/

CELLECTIS : Rational Genome Engineering
A company developing targeted gene replacement and modification technology.
http://www.cellectis.com

MDL Information Systems
Discovery informatics company for life sciences and chemistry. Makers of Assay Explorer software to track and datamine imaging based experiments.
http://www.mdli.com

Inpharmatica
Developers of the Biopendium, a resource of protein structure and function information that enables identification of distantly related proteins and thus exploration of the human proteome.
http://www.inpharmatica.com

Genaissance Pharmaceuticals, Inc.
Applies genomics and informatics technologies to improve drug development, pharmaceutical marketing and prescription medication.
http://www.genaissance.com/

LabVantage Solutions
LabVantage Solutions is a global provider of workflow driven automation tools, knowledge management software, implementation services, and consulting to leading discovery-oriented, high throughput screening, genomics, proteomics, pharmaceuticals, and combinatorial chemistry companies.
http://www.labvantage.com

BioTools Incorporated
Provides software tools to accelerate the research process: GeneTool for DNA sequence analysis, PepTool for protein sequence analysis, and ChromaTool for DNA sequence assembly.
http://www.biotools.com

GenOdyssee SA
Provides to the pharmaceutical, diagnostic and biotech industry full range of post-genomic services : HT SNP discovery and genotyping, and functional proteomics.
http://www.genodyssee.com/

Discovery Partners International
Discovery Partners International is the premier provider of technology, products and services that augment the drug discovery efforts of the pharmaceutical industry.
http://www.discoverypartners.com

Proteomes
Human animal proteome research, consulting and database. Searching for the proteome of birth, growth, aging and disease using proteomics tools, 2D and mass spectrometry. Bilingual but some English pages include Korean text.
http://www.proteomes.co.kr/

Glycominds
Company focusing on "more efficient and accurate bioinformatic analysis of complex carbohydrates and their interactions".
http://www.glycominds.com

3rd Millennium, Inc.
Our bioinformatics consulting, systems development, and integration services help ensure your bioinformatics systems are fully geared toward your success and unique strategies. We focus on deploying the best technologies for today while working on the best technologies for tomorrow.
http://www.3rdmill.com

ALCARA BioSciences
Microfluidics arrays ("lab-on-a-chip") for high-throughput pharmaceutical drug screening, multiplexed gene expression analysis, and multiplexed SNP genotyping.
http://www.aclara.com/

BioCarta
Web-based resource of information on gene function, proteomic pathways, and reagent exchange. Forum for information exchange and collaboration between researchers.
http://www.biocarta.com/

MathSoft Inc.
(now Insightful) is developer of S-PLUS, excellent statistical data mining software. Insightful provides many other data analysis tools.
http://www.insightful.com/products/splus/

Ocimum Biosolutions
Contract R&D services in bioinformatics, LIMS, genomics, and proteomics for the biotech and pharma industries.
http://www.ocimumbio.com

Stratagem Corporation
Provides open source enterprise solutions. From AD/DA data acquisition to process automation, workstations to network server solutions, open source software migration to custom software design, planning to installation and training.
http://www.stratagem-corporation.com

Cambridge Antibody Technology
Company developing human monoclonal antibodies as novel therapeutics. Also applying its technology platform to functional genomics to assist the discovery of new drug targets.
http://www.cambridgeantibody.com

GeneData
Provides customizable software solutions and related scientific services for the analysis of genomics and proteomics data.
http://www.genedata.com

Prokaria
A biotechnology company that is combining ecology and bioinformatics to directly discover novel genes in nature. Currently focussing on thermophiles.
http://prokaria.is

BioInformatics, Inc.
Provides market research to clients in the biotechnology, medical, and pharmaceutical industry.
http://www.gene2drug.com/

Corimbia, Inc.
Provides software products and consulting services for the processing and analysis of gene expression data.
http://www.corimbia.com

Metalife AD
Software company providing integrated molecular database technologies for life science research. NB: control to see site in English is at lower right
http://www.metalife.de

Myriad Biotechnology Tool: ProNet
Myriad's ProNet program is designed to rapidly identify large numbers of novel protein-protein interactions.
http://www.myriad.com/research/pronet.html

Bioinformatics Solutions Inc.
Professional algorithmic and software solutions for the bioinformatics industry: PROSPECT for protein structure prediction, PatternHunter for identifying all approximate repeats in a complete genome, and COPIA for discovering motifs in a family of protein sequences.
http://www.bioinformaticssolutions.com

INCOGEN, Inc.
The Institute for Computational Genomics (INCOGEN) focuses on computational and data management solutions to the complex challenges faced by researchers in plant and animal genomics.
http://www.incogen.com

Oxford GlycoSciences (OGS)
Provides proteomics-based drug discovery and development and identification of proteins directly associated with diseases.
http://www.ogs.com

e-Proteomics.net
Offers microarray products to further dermatology research. Webpage has information on techniques used to analyze proteins.
http://www.e-proteomics.net/

TIB MOLBIOL
DNA primer and probe synthesis and diagnostic PCR assay design.
http://www.tib-molbiol.com/

Rosetta Inpharmatics, Inc
Provides software solutions designed to accelerate life science research using advanced genomic data analysis technology.
http://www.rosettabio.com/

Metabolic Explorer
Explores and designs metabolic pathways.
http://www.metabolic-explorer.com/

Molecular Mining Corporation
Genomics, proteomics, combinatorial chemistry, computational science and machine learning for drug discovery.
http://www.molecularmining.com/

Bioinformatics Solutions Inc.
Tools for distant homology search, protein folding, phylogeny, motif finding, alignment, proteomics database and mining
http://darwin.bioinformaticssolutions.com

VizXlabs
Develops software systems for the acquisition, management and analysis of molecular biology data and information.
http://vizxlabs.com/

ProteomicsSURF
A Pointer to Proteomics Research Resources! ProteomicsSURF, a meta directory, is dedicated to provide web information on proteomics methods & protocols for both novice and advanced users by pointing appropriate 'directories' that list relevant and useful resources.
http://proteomicssurf.com

TimeLogic Corporation
With our DeCypher Bioinformatics Accelerator, TimeLogic speeds genomic discovery for biotechnology and pharmaceutical companies. DeCypher dramatically accelerates computationally intensive algorithms, including BLAST, Smith-Waterman and HMM analysis.
http://www.timelogic.com

geneticXchange
geneticXchange provides the only open system Data Integration Platform to help accelerate the drug discovery process for biotech and pharmaceutical companies.
http://www.geneticXchange.com/

MetaHelix Life Sciences
Metahelix Life Sciences is a company that specializes in scientific consulting, contract research, application software and product development in the emerging areas of life science informatics and genomics.
http://www.meta-helix.com

Gene-IT - High Performance Bioinformatics Software for Sequence Data Mining
Gene-IT is a bioinformatics company that provides life-science research organizations with scalable high performance software and scientific expertise for biological sequence data mining.
http://www.gene-it.com

Iobion Informatics LLC
Specializing in software for the analysis of microarray data (GeneTraffic).
http://www.iobion.com

BioDiscovery, Inc.
Offers microarray bioinformatics software and services.
http://www.biodiscovery.com

Syngene
Provides bio imaging systems, gel documentation systems and gel analysis software for UV, white light, chemiluminescence, fluorescence applications.
http://www.syngene.com/default.asp

Genomatica, Inc. - Home of the Genetic Circuits Simulation System
A leading innovator of in silico systems biology, building proprietary cellular-level models to accelerate the identification & production of more effective drugs, chemical & agricultural products, & enabling in-silico biological discovery.
http://www.genomatica.com/

DNA Software, Inc.
Provides consulting on nucleic acid thermodynamics and OMP, the Oligonucleotide Modeling Platform, a software framework for building applications to design multiplex PCR primers, probes and DNA microarrays.
http://www.dna-software.com

United Bioinformatica Inc. (UBI)
Provides bioinformatics software in Canada for Laboratory Information Management Systems (LIMS), sequence analysis, microarray expression analysis, and proteomics (1D and 2D gel image analysis).
http://www.ubi.ca

Geospiza, Inc.
Geospiza's bioinformatics software helps service, research, and clinical laboratories manage and analyze data from genomics, DNA sequencing, genotyping and proteomics.
http://www.geospiza.com

Genamics
Supplier of DNA and protein sequence analysis software.
http://genamics.com

LION Bioscience AG
Biological information technology company providing integrated solutions for genomics and bioinformatics to the life science industry.
http://www.lionbioscience.com/

Accelrys
Supplier of bioinformatics software for gene and protein sequence analysis, high-throughput screening systems and databases for managing bioassay information. Formerly Oxford Molecular, Genetics Computer Group (GCG), Molecular Simulations Inc. (MSI), and Synopsys Scientific Systems.
http://www.accelrys.com/

Hippron Physiomics Inc.
Develops web-based software for the visualization and analysis of biological signaling pathways for drug discovery and development.
http://www.hippron.com/

Tahoe Informatics
Consulting group specializing in training, marketing, and testing.
http://www.bioinformaticist.biz/

Bioxtal, proteomic services
Provides crystallography services and recombinant protein production by means of Semliki Forest Virus.
http://www.bioxtal.com/

Genolyze
Provides microarray and gene expression data analysis.
http://www.genolyze.com

Protein Pathways, Inc.
Uses protein interactions to aid in the therapeutic drug development.
http://www.proteinpathways.com

LifeSpan BioSciences
Provides gene expression and protein localization database aimed at drug-discovery programs. Also offers target validation by selection and prioritization.
http://www.lsbio.com/

BioBase
Biological databases, bioinformatics tools, and consulting in gene regulatory processes such as transcriptional control and signal transduction.
http://www.biobase.de

Analytica, Inc.
Applies advanced signal processing and artificial intelligence to protein function and microarray data analysis.
http://www.analytica-co.com

Insilico Bioinformatics Company
Insilico provides data centered bioinformatic tools for life science and pharma.
http://www.insilico.com

BlueGnome
Application of advanced statistical methods to the information bottlenecks in drug discovery.
http://www.cambridgebluegnome.com

Ariadne Genomics Inc.
Software for biological pathways visualization and analysis, functional interpretation of genetic information.
http://www.ariadnegenomics.com

Insilicos
Provides proteomics, metabolomics, and systems biology software for mass spectrometry data.
http://www.insilicos.com

Biomax Informatics AG
Offers annotated genome database, and DNA and protein sequence analysis tools.
http://www.biomax.com

Automated Handling Systems, Inc.
Java software development and consulting for the bioinformatics industry.
http://www.autohandle.com

Metalife AG
Developing bioinformatics software for sequence analysis, sequence based predictions, and biological pathway analysis and visualization.
http://metalife.orbitel.bg

Genomining
Specializes in the data-mining, discovery, interpretation and management of biological data.
http://www.genomining.com

MediCel Ltd.
Software and services for reverse engineering and modeling of biochemical pathways for drug target discovery and validation projects related to inflammatory diseases.
http://www.medicel.com/

ALMA Bioinformatics
Develops tools for microarray data analysis and text-mining from scientific texts.
http://www.almabioinfo.com

Mathematical Ecology
Consulting by mathematical models for biological and ecological problems.
http://www.mathecology.com

SBI Science LLC
Consulting in gene product analysis, including structure-based sequence alignment, homology modeling, and x-ray crystallography.
http://sbiscience.com

Relevant Software Inc.
Project development services for life science software projects.
http://www.relevantsoftware.com

Quantiom
Products and services for bioanalytical data analysis.
http://www.quantiom.de

OmniViz Inc.
Supplier of Clustering and Data Visualization software to the Life and Chemical Sciences industries.
http://www.omniviz.com

Invenio Biosolutions
Offers custom software development for gene and protein sequence analysis, and drug discovery.
http://www.inveniobio.com

Genomatix Software
Offers products and services in functional genomics of gene regulation.
http://www.genomatix.com

CSIRO Bioinformatics
Provides statistical consulting and specialised software development services to the biotechnology industry.
http://www.bioinformatics.csiro.au

Predictive Patterns Software
Provides software for visualization, analysis and classification of gene expression and proteomics data.
http://www.predictivepatterns.com

Essential Informatics
Provides software consulting services to early-stage biotechnology ventures.
http://www.essentialinformatics.com

BioSoftSolutions
Develops software analysis tools for mass spectrometry-based proteomics and microarray-based image processing.
http://www.biosoftsolutions.de

ProCeryon Biosciences GmbH
Provides protein sequence and structure based bioinformatics tools for the pharmaceutical and biotech industries.
http://www.proceryon.com

Biosiris
Bioinformatics company specialising in molecular modeling.
http://www.biosiris.com/en/index.html

Ingenovis
Develops bioinformatics software for molecular visualization, sequence analysis, information and data integration, and organization and management systems.
http://www.ingenovis.com

Seascape Learning
Distributes structural bioinformatics software and educational material.
http://www.seascapelearning.com/

Biosift, Inc.
Designs tools for comparative genomic data analysis, data integration, and visualization for genomic and protein data.
http://biosift.com

CeuticalSoft
provides custom Excel programming services for drug discovery applications.
http://www.ceuticalsoft.com

Sequence Bioinformatics
Canadian company providing binformatics and knowledge management solutions for life science researchers.
http://www.seqbio.com

Evolutionary BioInformatics
Bioinformatics/genomics consultancy with expertise in comparative genomics and model organisms for target development and biological understanding.
http://evobio.info

Nonlinear Dynamics
Develops scientific software for proteomics, genomics, drug discovery and bioinformatics. Products include Phoretix, Progenesis and Progenera.
http://www.nonlinear.com/

Strand Genomics:Life science informatics company - Algorithms for life
Develops softwares (avadis, acuris ) for analysis of gene expression, and proteomics data for drug discovery and development.
http://www.strandgenomics.com

Clondiag Chip Technologies
Develops software for the analysis and management of microarray data.
http://www.clondiag.com/

Array Genetics, Inc.
Provider of software solutions to meet the needs of researchers seeking to extract information from genome sequencing projects and DNA microarray screening. Free access to SeqIt, an on-line protein database mining program.
http://www.arraygenetics.com

Industry Support Programme
Helping industry adapt quickly to, and maximise benefits from, developments in the fast-growing fields of bioinformatics, computational biology, and information technology in general - from the European Bioinformatics Inst.
http://industry.ebi.ac.uk/

Genomica Corporation
BioPharmaceutical software for functional genomics, gene discovery, and positional cloning; using genetic analysis, physical mapping, and sequence analysis.
http://www.genomica.com

Silicon Genetics
Bioinformatics tools for visualization and analysis of gene expression data, allowing scientists to extract knowledge for drug discovery and gene function identification.
http://www.sigenetics.com

Structural Bioinformatics, Inc.
Expediting lead discovery by providing structural data and analysis for drug targets.
http://www.strubix.com/

InnaPhase Corporation Web Site
InnaPhase provides innovative desktop and enterprise technology solutions for early drug development teams.
http://www.innaphase.com

Biodatabases
Molecular database technologies. To-Oracle database conversions. Data-mining and eCommerce development for genomics and proteomics.
http://www.biodatabases.com

Tripos, Inc.
Provider of discovery research software & services to pharmaceutical, biotechnology, & other life sciences companies worldwide.
http://www.tripos.com/

Matrix Science
Mascot, the on-line search engine for protein identification using mass spectrometry data
http://www.matrixscience.com/

LabBook
Provides XML-powered Internet solutions and bioinformatics applications for the life science researcher to access, data mine, integrate, store, and visualize biomedical information.
http://www.labbook.com

CuraGen Corp.
GeneScape Portal promoting CuraTools, an integrated suite of bioinformatics tools for easy analyses on collections of sequences.
http://curatools.curagen.com

Rosetta Inpharmatics
Informational genomics - the integration of bioinformatics with genomics tools to accelerate and improve the drug discovery process. Providing an economical, reliable, and flexible technology for pharmaceutical, biotechnology and agricultural companies.
http://www.rii.com

AMITA Databases
Front-line and back-end bio-database development services for bioinformatics projects: design and maintenance of public sequence repositories, commercial data mining applications of molecular biology databases, automated data mirroring, database conversion.
http://www.amita.com/

Gene Biotechnologies
Offering human, mouse and drosophila genome databases, a View&Search program and advanced products in development. Services include converting custom databases and adding special features.
http://www.gene-biotech.com/

MiraiBio Inc
Hitachi Genetic Systems, by MiraiBio Inc, offers quality instruments, software, consumables and supporting applications for the genetics/molecular biology laboratory.
http://www.miraibio.com/

eBioinformatics BioNavigator
eBioinformatics offers BioNavigator a web-based service incorporating tools and databases from many sources; enabling you to perform sequence analysis, database searching, PCR primer design, and molecular modeling.
http://www.BioNavigator.com/

Caesar Software, LLC
Offers iOligo software which designs oligonucleotides for PCR or sequencing reactions, and orders them directly from synthesis companies.
http://www.caesarsoftware.com

Informatics
Providing integrated information management solutions for the life sciences.
http://www.appliedbiosystems.com/Informatics/

ePitope Informatics
Specializes in epitope prediction and protein analysis for proteomics, diagnostics, therapeutics, life science research, and antibody production.
http://www.epitope-informatics.com

Compugen
Develops and markets platforms, tools and products that accelerate post-genomic research, the advanced study of proteins and protein pathways, and drug target discovery.
http://cgen.com

LabDB.com
Do fast track experiments online for gene analysis, homology analysis for fingerprinting, agarose gel image comparison applications
http://www.labdb.com

Biosentients Bioinformatics Software
The Intelligent Molecular Object (IMO) Platform adds speed and efficiency to global data access and integrated analysis. Also: applications integration, automated new applications assembly, ISO9000/FDA/CDER/CFIR validation, distributed computing.
http://www.biosentients.com

DECODON - software tools for functional genomics
makers of Delta2D, software for difference analysis of 2D electrophoresis gels.
http://www.decodon.com/welcome.html

Applied Biosystems
Offers instrument-based software for the discovery, development, and manufacturing of drugs.
http://www.appliedbiosystems.com



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